Free Software for Neuron Tracing


neuTube is open source software for reconstructing neurons from fluorescence microscope images.

The main function of neuTube is to generate a neuron structure from a 3D image with user interaction, which mainly consists of mouse clicks. It can also load SWC files from any other source for visualization or further editing.

The Software is provided “as is” without warranty of any kind, either express or implied, including without limitation any implied warranties of condition, uniterrupted use, merchantability, fitness for a particular purpose, or non-infringement.

How to cite: L. Feng, T. Zhao, and J. Kim, neuTube 1.0: A New Design for Efficient Neuron Reconstruction Software Based on The SWC Format, eNeuro, DOI: 10.1523/ENEURO.0049-14.2014. (Link)